Journal of Biomedical Informatics
Workflow composition and enactment using jORCA
ISoLA'10 Proceedings of the 4th international conference on Leveraging applications of formal methods, verification, and validation - Volume Part I
jORCA and magallanes sailing together towards integration of web services
JBI'10 Proceedings of the 10th Spanish conference on Bioinformatics for Personalized Medicine
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Summary: Here we present a computational protocol to analyze the promoter regions of a given set of co-expressed genes, and its implementation through the use of Web services technologies. This protocol aims to cluster a set of co-regulated genes in subsets of genes showing similar configurations of transcription factor binding sites. All the steps of this protocol have been developed as web services that are compliant with BioMoby specifications. Availability: { http://genome.imim.es/cgi-bin/moby/GeneClustering_DataSubmission.cgi} Contact: arnaud.kerhornou@crg.es Supplementary information: Supplementary data are available at {http://genome.imim.es/webservices/}