Metrics based performance control over text mining tools in bioinformatics
Proceedings of the International Conference on Advances in Computing, Communication and Control
Generating synopses for document-element search
Proceedings of the 18th ACM conference on Information and knowledge management
Summarizing figures, tables, and algorithms in scientific publications to augment search results
ACM Transactions on Information Systems (TOIS)
ISMB/ECCB'09 Proceedings of the 2009 workshop of the BioLink Special Interest Group, international conference on Linking Literature, Information, and Knowledge for Biology
Using MeSH to expand queries in medical image retrieval
MCBR-CDS'11 Proceedings of the Second MICCAI international conference on Medical Content-Based Retrieval for Clinical Decision Support
Automatic figure classification in bioscience literature
Journal of Biomedical Informatics
Semantics visualization for fostering search result comprehension
ESWC'12 Proceedings of the 9th international conference on The Semantic Web: research and applications
Scientific table type classification in digital library
Proceedings of the 2012 ACM symposium on Document engineering
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Summary: The BioText Search Engine is a freely available Web-based application that provides biologists with new ways to access the scientific literature. One novel feature is the ability to search and browse article figures and their captions. A grid view juxtaposes many different figures associated with the same keywords, providing new insight into the literature. An abstract/title search and list view shows at a glance many of the figures associated with each article. The interface is carefully designed according to usability principles and techniques. The search engine is a work in progress, and more functionality will be added over time. Availability: http://biosearch.berkeley.edu Contact:divoli@ischool.berkeley.edu and hearst@ischool.berkeley.edu