Aligning biomolecular networks using modular graph kernels
WABI'09 Proceedings of the 9th international conference on Algorithms in bioinformatics
Protein-to-protein interactions: Technologies, databases, and algorithms
ACM Computing Surveys (CSUR)
Identification of conserved protein complexes by module alignment
International Journal of Data Mining and Bioinformatics
Tutorial on biological networks
Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery
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Summary: The identification of protein complexes is a fundamental challenge in interpreting protein–protein interaction data. Cross-species analysis allows coping with the high levels of noise that are typical to these data. The NetworkBLAST web-server provides a platform for identifying protein complexes in protein-protein interaction networks. It can analyze a single network or two networks from different species. In the latter case, NetworkBLAST outputs a set of putative complexes that are evolutionarily conserved across the two networks. Availability: NetworkBLAST is available as web-server at: www.cs.tau.ac.il/~roded/networkblast.htm Contact:kalaevma@post.tau.ac.il; roded@post.tau.ac.il