SYCAMORE—a systems biology computational analysis and modeling research environment

  • Authors:

  • Andreas Weidemann;Stefan Richter;Matthias Stein;Sven Sahle;Ralph Gauges;Razif Gabdoulline;Irina Surovtsova;Nils Semmelrock;Bruno Besson;Isabel Rojas;Rebecca Wade;Ursula Kummer

  • Affiliations:

  • -;-;-;-;-;-;-;-;-;-;-;-

  • Venue:
  • Bioinformatics
  • Year:
  • 2008

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Abstract

Summary: SYCAMORE is a browser-based application that facilitates construction, simulation and analysis of kinetic models in systems biology. Thus, it allows e.g. database supported modelling, basic model checking and the estimation of unknown kinetic parameters based on protein structures. In addition, it offers some guidance in order to allow non-expert users to perform basic computational modelling tasks. Availability: SYCAMORE is freely available for academic use at http://sycamore.eml.org. Commercial users may acquire a license. Contact: ursula.kummer@bioquant.uni-heidelberg.de