Short Communication: Protein ligand interaction database (PLID)

Authors:
A. Srinivas Reddy;H.S. Durga Amarnath;Raju S. Bapi;G. Madhavi Sastry;G. Narahari Sastry
Affiliations:
Molecular Modeling Group, Organic Chemical Sciences, Indian Institute of Chemical Technology, Hyderabad 500 007, Andhra Pradesh, India;Computational Intelligence Lab, Department of Computer and Information Sciences, University of Hyderabad, Gachibowli, Hyderabad 500 046, India;Computational Intelligence Lab, Department of Computer and Information Sciences, University of Hyderabad, Gachibowli, Hyderabad 500 046, India;Molecular Modeling Group, Organic Chemical Sciences, Indian Institute of Chemical Technology, Hyderabad 500 007, Andhra Pradesh, India;Molecular Modeling Group, Organic Chemical Sciences, Indian Institute of Chemical Technology, Hyderabad 500 007, Andhra Pradesh, India
Venue:
Computational Biology and Chemistry
Year:
2008

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Abstract

A comprehensive database named, protein ligand interaction database (PLID), is created with 6295 ligands bound to proteins extracted from the protein data bank (PDB). This is by far the most comprehensive database of physico-chemical properties, quantum mechanical descriptors and the residues present in the active site of proteins. It is a publicly available web-based database (via the Internet) at http://203.199.182.73/gnsmmg/databases/plid/.