A task-based information retrieval interface to support bioinformatics analysis

Authors:
Joan C. Bartlett;Tomasz Neugebauer
Affiliations:
McGill University, Montreal, QC, Canada;Concordia University Libraries, Montreal, QC, Canada
Venue:
Proceedings of the second international symposium on Information interaction in context
Year:
2008

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Abstract

In this research-in-progress paper, we present the design and pilot testing of an interface created to support the integration of bioinformatics analysis with biological laboratory research. The interface presents a task-based bioinformatics analysis protocol detailing the functional analysis of a gene sequence, a complex information task that is problematic for many biologists. The interface guides the user through a series of 14 analytical steps, providing details on why to follow the step, what data is input/output, what tool(s) to use and how to interpret the results. It provides the framework and support within which the user can accomplish the information task. Our pilot testing has demonstrated initial evidence of the effectiveness of the interface, but also highlighted areas for clarification and enhancement.