Transforming State-Based Models to P Systems Models in Practice

  • Authors:
  • Petros Kefalas;Ioanna Stamatopoulou;George Eleftherakis;Marian Gheorghe

  • Affiliations:
  • Department of Computer Science, CITY College, Thessaloniki, Greece;South-East European Research Centre, Thessaloniki, Greece;Department of Computer Science, CITY College, Thessaloniki, Greece;Department of Computer Science, University of Sheffield, UK

  • Venue:
  • Membrane Computing
  • Year:
  • 2009

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Abstract

We present an automatic practical transformation of Communicating X-machines to Population P Systems. The resulting compiler is able to take as input a Communicating X-machine model written in an appropriately designed language (XMDL) and produce a Population P System in another notation (PPSDL). The latter contains only transformation and communication rules. However, the user can further enhance the models with more rules that deal with the reconfiguration of structure of the network of cells. XMDL, PPSDL and their accompanied compilers and animators are briefly presented. The principles of transformations and the transformation templates of the compiler are discussed. We use an example model of a biological system, namely an ant colony, to demonstrate the usefulness of this approach.