The Grid Enablement and Sustainable Simulation of Multiscale Physics Applications

  • Authors:
  • Yingwen Song;Yoshio Tanaka;Hiroshi Takemiya;Aiichiro Nakano;Shuji Ogata;Satoshi Sekiguchi

  • Affiliations:
  • -;-;-;-;-;-

  • Venue:
  • CCGRID '09 Proceedings of the 2009 9th IEEE/ACM International Symposium on Cluster Computing and the Grid
  • Year:
  • 2009

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Abstract

The understanding of H diffusion in materials is pivotal to designing suitable processes. Though a nudged elastic band (NEB)+molecular dynamics (MD)/quantum mechanics (QM) algorithm has been developed to simulate H diffusion in materials by our group, it is often not computationally feasible for large-scale models on a conventional single system. We thus gridify the NEB+MD/QM algorithm on the top of an integrated framework developed by our group. A two days simulation on H diffusion in alumina has been successfully carried out over a Trans-Pacific Grid infrastructure consisting of supercomputers provided by TeraGrid and AIST. In this paper, we describe the NEB+MD/QM algorithm, briefly introduce the framework middleware, present the grid enablement work, and report the techniques to achieve fault-tolerance and load-balance for sustainable simulation. We believe our experience is of benefit to both middleware developers and application users.