Exploring Large Graphs in 3D Hyperbolic Space
IEEE Computer Graphics and Applications
Graph Drawing Tools for Bioinformatics Research: An Overview
CBMS '06 Proceedings of the 19th IEEE Symposium on Computer-Based Medical Systems
Programming Python
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The importance of a comprehensive environment for the depiction of biomolecular networks in the domain of system biology has been emphasised after the completion of genomic, proteomic and metabolomic initatives. Grafta is a software application developed for the three dimensional illustration of biomolecular interactions such as protein interaction networks. Grafta allows its user to move in a 3D environment through a complex assembly of biomolecules represented by 3D objects such as spheres. Their interactions are displayed by an array of 3D tubes. One novelty in Grafta is its anthropomorphic navigation of the viewpoint with respect to the displayed biomolecular network.