Fast Approximate Energy Minimization via Graph Cuts
IEEE Transactions on Pattern Analysis and Machine Intelligence
What Energy Functions Can Be Minimizedvia Graph Cuts?
IEEE Transactions on Pattern Analysis and Machine Intelligence
An Experimental Comparison of Min-Cut/Max-Flow Algorithms for Energy Minimization in Vision
IEEE Transactions on Pattern Analysis and Machine Intelligence
Journal of Cognitive Neuroscience
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In this paper, we describe a new methodology for defining brain regions-of-interset (ROIs) in functional magnetic resonance imaging (fMRI) data. The ROIs are defined based on their functional connectivity to other ROIs, i.e., ROIs are defined as sets of voxels with similar connectivity patterns to other ROIs. The method relies on 1) a spatially regularized canonical correlation analysis for identifying maximally correlated signals, which are not due to correlated noise; 2) a test for merging ROIs which have similar connectivity patterns to the other ROIs; and 3) a graph-cuts optimization for assigning voxels to ROIs. Since our method is fully connectivity-based, the extracted ROIs and their corresponding time signals are ideally suited for a subsequent brain connectivity analysis.