Next generation software for functional trend analysis

  • Authors:
  • Gabriel F. Berriz;John E. Beaver;Can Cenik;Murat Tasan;Frederick P. Roth

  • Affiliations:
  • -;-;-;-;-

  • Venue:
  • Bioinformatics
  • Year:
  • 2009

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Abstract

Summary: FuncAssociate is a web application that discovers properties enriched in lists of genes or proteins that emerge from large-scale experimentation. Here we describe an updated application with a new interface and several new features. For example, enrichment analysis can now be performed within multiple gene-and protein-naming systems. This feature avoids potentially serious translation artifacts to which other enrichment analysis strategies are subject. Availability: The FuncAssociate web application is freely available to all users at http://llama.med.harvard.edu/funcassociate. Contact: fritz_roth@hms.harvard.edu