Emergence of genetic coding: an information-theoretic model

  • Authors:
  • Mahendra Piraveenan;Daniel Polani;Mikhail Prokopenko

  • Affiliations:
  • CSIRO Information and Communication Technology Centre, North Ryde, NSW, Australia;Department of Computer Science, University of Hertfordshire, Hatfield, United Kingdom;CSIRO Information and Communication Technology Centre, North Ryde, NSW, Australia

  • Venue:
  • ECAL'07 Proceedings of the 9th European conference on Advances in artificial life
  • Year:
  • 2007

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Abstract

This paper introduces a simple model for evolutionary dynamics approaching the "coding threshold", where the capacity to symbolically represent nucleic acid sequences emerges in response to a change in environmental conditions. The model evolves a dynamical system, where a conglomerate of primitive cells is coupled with its potential encoding, subjected to specific environmental noise and inaccurate internal processing. The separation between the conglomerate and the encoding is shown to become beneficial in terms of preserving the information within the noisy environment. This selection pressure is captured information-theoretically, as an increase in mutual information shared by the conglomerate across time. The emergence of structure and useful separation inside the coupled system is accompanied by self-organization of internal processing, i.e. an increase in complexity within the evolving system.