Adaptation in natural and artificial systems
Adaptation in natural and artificial systems
Genetic algorithms + data structures = evolution programs (3rd ed.)
Genetic algorithms + data structures = evolution programs (3rd ed.)
Numerical Optimization of Computer Models
Numerical Optimization of Computer Models
Prediction of Oligopeptide Conformations via Deterministic Global Optimization
Journal of Global Optimization
Fitness Distance Correlation as a Measure of Problem Difficulty for Genetic Algorithms
Proceedings of the 6th International Conference on Genetic Algorithms
The Density of States - A Measure of the Difficulty of Optimisation Problems
PPSN IV Proceedings of the 4th International Conference on Parallel Problem Solving from Nature
An analysis of the behavior of a class of genetic adaptive systems.
An analysis of the behavior of a class of genetic adaptive systems.
IEEE Transactions on Evolutionary Computation
A genetic algorithm for shortest path routing problem and the sizing of populations
IEEE Transactions on Evolutionary Computation
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Ab initio protein structure prediction involves determination of the three-dimensional (3D) conformation of proteins on the basis of their amino acid sequence, a potential energy (PE) model that captures the physics of the interatomic interactions, and a method to search for and identify the global minimum in the PE (or free energy) surface such as an evolutionary algorithm (EA). Many PE models have been proposed over the past three decades and more. There is currently no understanding of how the behavior of an EA is affected by the PE model used. The study reported here shows that the EA behavior can be profoundly affected: the EA performance obtained when using the ECEPP PE model is significantly worse than that obtained when using the Amber, OPLS, and CVFF PE models, and the optimal EA control parameter values for the ECEPP model also differ significantly from those associated with the other models.