Semi-supervised outcome prediction for a type of human brain tumour using partially labeled MRS information

  • Authors:
  • Raúl Cruz-Barbosa;Alfredo Vellido

  • Affiliations:
  • Universitat Politècnica de Catalunya, Barcelona, Spain and Universidad Tecnológica de la Mixteca, Huajuapan, Oaxaca, México;Universitat Politècnica de Catalunya, Barcelona, Spain

  • Venue:
  • IDEAL'09 Proceedings of the 10th international conference on Intelligent data engineering and automated learning
  • Year:
  • 2009

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Abstract

The diagnosis and prognosis of human brain tumours, especially when they are aggresive, are sensitive clinical tasks that usually require non-invasive measurement techniques. Outcome information for aggressive tumours, in particular, is usually scarce. In this paper, we aim to gauge the capability of a novel semi-supervised model, SS-Geo-GTM, to infer outcome stages from a very limited amount of available stage labels and Magnetic Resonance Spectroscopy (MRS) data corresponding to Glioblastoma, which is an aggressive tumor type. This model stems from a geodesic distance-based extension of Generative Topographic Mapping (Geo-GTM) that prioritizes neighbourhood relationships along a generated manifold embedded in the observed data space.