Fast discovery of association rules
Advances in knowledge discovery and data mining
A Survey of Combinatorial Gray Codes
SIAM Review
Levelwise Search and Borders of Theories in KnowledgeDiscovery
Data Mining and Knowledge Discovery
Parameterized Complexity Theory (Texts in Theoretical Computer Science. An EATCS Series)
Parameterized Complexity Theory (Texts in Theoretical Computer Science. An EATCS Series)
Journal of Artificial Intelligence Research
A hidden markov technique for haplotype reconstruction
WABI'05 Proceedings of the 5th International conference on Algorithms in Bioinformatics
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The analysis of haplotype data of human populations has received much attention recently. For instance, problems such as Haplotype Reconstruction are important intermediate steps in gene association studies, which seek to uncover the genetic basis of complex diseases. In this chapter, we explore the application of probabilistic logic learning techniques to haplotype data. More specifically, a new haplotype reconstrcution technique based on Logical Hidden Markov Models is presented and experimentally compared against other state-of-the-art haplotyping systems. Furthermore, we explore approaches for combining haplotype reconstructions from different sources, which can increase accuracy and robustness of reconstruction estimates. Finally, techniques for discovering the structure in haplotype data at the level of haplotypes and population are discussed.