ICA-based sparse features recovery from FMRI datasets

  • Authors:
  • Gaël Varoquaux;Merlin Keller;Jean-Baptiste Poline;Philippe Ciuciu;Bertrand Thirion

  • Affiliations:
  • INRIA, Saclay-Île de France, Saclay, France and CEA, DSV, I2BM, Neurospin, Saclay, France;INRIA, Saclay-Île de France, Saclay, France and CEA, DSV, I2BM, Neurospin, Saclay, France;CEA, DSV, I2BM, Neurospin, Saclay, France;CEA, DSV, I2BM, Neurospin, Saclay, France;INRIA, Saclay-Île de France, Saclay, France and CEA, DSV, I2BM, Neurospin, Saclay, France

  • Venue:
  • ISBI'10 Proceedings of the 2010 IEEE international conference on Biomedical imaging: from nano to Macro
  • Year:
  • 2010

Quantified Score

Hi-index 0.00

Visualization

Abstract

Spatial Independent Components Analysis (lCA) is increasingly used in the context of functional Magnetic Resonance Imaging (fMRI) to study cognition and brain pathologies. Salient features present in some of the extracted Independent Components (lCs) can be interpreted as brain networks, but the segmentation of the corresponding regions from ICs is still ill-controlled. Here we propose a new ICA-based procedure for extraction of sparse features from fMRI datasets. Specifically, we introduce a new thresholding procedure that controls the deviation from isotropy in the ICA mixing model. Unlike current heuristics, our procedure guarantees an exact, possibly conservative, level of specificity in feature detection. We evaluate the sensitivity and specificity of the method on synthetic and fMRI data and show that it outperforms state-of-the-art approaches.