Enabling annotation provenance in bioinformatics workflow applications

Authors:
Milene Pereira Guimarães;Maria Cláudia Cavalcanti
Affiliations:
Seção de Engenharia de Computação, Instituto Militar de Engenharia, Rio de Janeiro, RJ, Brazil;Seção de Engenharia de Computação, Instituto Militar de Engenharia, Rio de Janeiro, RJ, Brazil
Venue:
BSB'10 Proceedings of the Advances in bioinformatics and computational biology, and 5th Brazilian conference on Bioinformatics
Year:
2010

Citing 3
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Abstract

Nowadays, the resulting data of each step of genomic annotation processes are typically used for annotation provenance. However, recent initiatives in the direction of capturing annotation provenance data do not support the Bioinformatics developer on building their own provenance enabled applications. This work proposes the ArCaP architecture, which aims at supporting the development of provenance enabled applications and at facilitating the access to annotation provenance data. Although the focus is on Bioinformatics applications, this approach is useful to other scientific domains.