Suffix arrays: a new method for on-line string searches
SIAM Journal on Computing
Journal of Algorithms
Succinct Representation of Balanced Parentheses and Static Trees
SIAM Journal on Computing
High-order entropy-compressed text indexes
SODA '03 Proceedings of the fourteenth annual ACM-SIAM symposium on Discrete algorithms
Space-Economical Algorithms for Finding Maximal Unique Matches
CPM '02 Proceedings of the 13th Annual Symposium on Combinatorial Pattern Matching
Replacing suffix trees with enhanced suffix arrays
Journal of Discrete Algorithms - SPIRE 2002
Compressed Suffix Arrays and Suffix Trees with Applications to Text Indexing and String Matching
SIAM Journal on Computing
Representing Trees of Higher Degree
Algorithmica
ACM Computing Surveys (CSUR)
Ultra-succinct representation of ordered trees
SODA '07 Proceedings of the eighteenth annual ACM-SIAM symposium on Discrete algorithms
Compressed Suffix Trees with Full Functionality
Theory of Computing Systems
Permuted Longest-Common-Prefix Array
CPM '09 Proceedings of the 20th Annual Symposium on Combinatorial Pattern Matching
Universal Succinct Representations of Trees?
ICALP '09 Proceedings of the 36th International Colloquium on Automata, Languages and Programming: Part I
Engineering a compressed suffix tree implementation
Journal of Experimental Algorithmics (JEA)
A Compressed Enhanced Suffix Array Supporting Fast String Matching
SPIRE '09 Proceedings of the 16th International Symposium on String Processing and Information Retrieval
Faster entropy-bounded compressed suffix trees
Theoretical Computer Science
Breaking a Time-and-Space Barrier in Constructing Full-Text Indices
SIAM Journal on Computing
Information Processing Letters
LATIN'08 Proceedings of the 8th Latin American conference on Theoretical informatics
Advantages of Shared Data Structures for Sequences of Balanced Parentheses
DCC '10 Proceedings of the 2010 Data Compression Conference
Fully-functional succinct trees
SODA '10 Proceedings of the twenty-first annual ACM-SIAM symposium on Discrete Algorithms
Sampled longest common prefix array
CPM'10 Proceedings of the 21st annual conference on Combinatorial pattern matching
Optimal succinctness for range minimum queries
LATIN'10 Proceedings of the 9th Latin American conference on Theoretical Informatics
Practical compressed suffix trees
SEA'10 Proceedings of the 9th international conference on Experimental Algorithms
Note: Combined data structure for previous- and next-smaller-values
Theoretical Computer Science
ACM Transactions on Algorithms (TALG)
Inverted indexes for phrases and strings
Proceedings of the 34th international ACM SIGIR conference on Research and development in Information Retrieval
Lempel-Ziv factorization revisited
CPM'11 Proceedings of the 22nd annual conference on Combinatorial pattern matching
Space-Efficient Preprocessing Schemes for Range Minimum Queries on Static Arrays
SIAM Journal on Computing
Compressed suffix trees for repetitive texts
SPIRE'12 Proceedings of the 19th international conference on String Processing and Information Retrieval
Computing the longest common prefix array based on the Burrows-Wheeler transform
Journal of Discrete Algorithms
Approximate string matching by position restricted alignment
Proceedings of the Joint EDBT/ICDT 2013 Workshops
RCSI: scalable similarity search in thousand(s) of genomes
Proceedings of the VLDB Endowment
FRESCO: Referential Compression of Highly Similar Sequences
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
A Compressed Suffix Tree Based Implementation With Low Peak Memory Usage
Electronic Notes in Theoretical Computer Science (ENTCS)
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Let A be an array of n elements taken from a totally ordered set. We present a data structure of size 3n + o(n) bits that allows us to answer the following queries on A in constant time, without accessing A: (1) given indices i j, find the position of the minimum in A[i..j], (2) given index i, find the first index to the left of i where A is strictly smaller than at i, and (3) same as (2), but to the right of the query index. Based on this, we present a new compressed suffix tree (CST) with O(1)- navigation that is smaller than previous CSTs. Our data structure also provides a new (practical) approach to compress the LCP-array.