Data-intensive computing and digital libraries
Communications of the ACM
Scientific workflow management and the Kepler system: Research Articles
Concurrency and Computation: Practice & Experience - Workflow in Grid Systems
Enabling community access to TeraGrid visualization resources: Research Articles
Concurrency and Computation: Practice & Experience - Science Gateways—Common Community Interfaces to Grid Resources
Data Management Challenges of Data-Intensive Scientific Workflows
CCGRID '08 Proceedings of the 2008 Eighth IEEE International Symposium on Cluster Computing and the Grid
A Web-Based Interactive Monitoring System for Molecular Simulation
FBIT '07 Proceedings of the 2007 Frontiers in the Convergence of Bioscience and Information Technologies
IBM Journal of Research and Development
Python Web Development with Django
Python Web Development with Django
Enabling Advanced Visualization Tools in a Web-Based Simulation Monitoring System
E-SCIENCE '09 Proceedings of the 2009 Fifth IEEE International Conference on e-Science
Getting StartED with Dojo
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High performance scientific computer simulations created with such systems as the University of Chicago's FLASH code generate enormous amounts of data that must be captured, cataloged, and analyzed. Unless this is formally done, monitoring such simulations, tracking and reproducing old ones, and analyzing and archiving their output, can be haphazard and idiosyncratic. Smaash, a simulation management and analysis system that has been developed at the University of Chicago and Argonne National Laboratory, seeks to solve some of these problems by offering what approaches a single point of control and analysis, a metadata-base, and a set of tools that automate some of what scientists have been doing by hand. Smaash was designed to be independent of the particular simulation code, and is accessible from many computing platforms. It is automatic and standardized, and was built using open source software tools. Data security is considered throughout the process, yet users are insulated from onerous verification procedures. Because the system was developed with feedback from scientific users, its user interface reflects how scientists work in their daily life. We describe our system and a typical simulation it was designed to support. We illustrate its utility with several examples describing our experience of freeing scientists from the data manipulation phase to focus on the computational results and the analysis of high performance computing.