On sequential Monte Carlo sampling methods for Bayesian filtering
Statistics and Computing
On Computing the Underlying Fiber Directions from the Diffusion Orientation Distribution Function
MICCAI '08 Proceedings of the 11th international conference on Medical Image Computing and Computer-Assisted Intervention - Part I
BTK: An open-source toolkit for fetal brain MR image processing
Computer Methods and Programs in Biomedicine
IPMI'13 Proceedings of the 23rd international conference on Information Processing in Medical Imaging
Adaptive multi-modal particle filtering for probabilistic white matter tractography
IPMI'13 Proceedings of the 23rd international conference on Information Processing in Medical Imaging
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By assuming that orientation information of brain white matter fibers can be inferred from DiffusionWeighted Magnetic Resonance Imaging (DWMRI) measurements, tractography algorithms provide an estimation of the brain connectivity in-vivo. The two key ingredients of tractography are the diffusion model (tensor, high-order tensor, Q-ball, etc.) and the way to deal with uncertainty during the tracking process (deterministic vs probabilistic). In this paper, we investigate the use of an analytical Q-ball model for the diffusion data within a well-formalized particle filtering framework. The proposed method is validated and compared to other tracking algorithms on the MICCAI'09 contest Fiber Cup phantom and on in-vivo brain DWMRI data.