A translation approach to portable ontology specifications
Knowledge Acquisition - Special issue: Current issues in knowledge modeling
The role of domain knowledge in data mining
CIKM '95 Proceedings of the fourth international conference on Information and knowledge management
Logic-based techniques in data integration
Logic-based artificial intelligence
Creating Semantic Web Contents with Protégé-2000
IEEE Intelligent Systems
Models for semantic interoperability in service-oriented architectures
IBM Systems Journal
Accelerating disease gene identification through integrated SNP data analysis
DILS'07 Proceedings of the 4th international conference on Data integration in the life sciences
An ontological modeling approach to cerebrovascular disease studies: The NEUROWEB case
Journal of Biomedical Informatics
On the secure sharing and aggregation of data to support systems biology research
DILS'10 Proceedings of the 7th international conference on Data integration in the life sciences
Suggested ontology for pharmacogenomics (SO-Pharm): modular construction and preliminary testing
OTM'06 Proceedings of the 2006 international conference on On the Move to Meaningful Internet Systems: AWeSOMe, CAMS, COMINF, IS, KSinBIT, MIOS-CIAO, MONET - Volume Part I
Hi-index | 0.00 |
Pharmacogenomics explores the impact of individual genomic variations in health problems such as adverse drug reactions. Records of millions of genomic variations, mostly known as Single Nucleotide Polymorphisms (SNP), are available today in various overlapping and heterogeneous databases. Selecting and extracting from these databases or from private sources a proper set of polymorphisms are the first steps of a KDD (Knowledge Discovery in Databases) process in pharmacogenomics. It is however a tedious task hampered by the heterogeneity of SNP nomenclatures and annotations. Standards for representing genomic variants have been proposed by the Human Genome Variation Society (HGVS). The SNP-Converter application is aimed at converting any SNP description into an HGVS-compliant pivot description and vice versa. Used in the frame of a knowledge system, the SNP-Converter application contributes as a wrapper to semantic data integration and enrichment.