Automatic Sequences: Theory, Applications, Generalizations
Automatic Sequences: Theory, Applications, Generalizations
Colored de Bruijn Graphs and the Genome Halving Problem
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Algorithmic Combinatorics on Partial Words (Discrete Mathematics and Its Applications)
Algorithmic Combinatorics on Partial Words (Discrete Mathematics and Its Applications)
On the Complexity of Deciding Avoidability of Sets of Partial Words
DLT '09 Proceedings of the 13th International Conference on Developments in Language Theory
On minimal Sturmian partial words
Discrete Applied Mathematics
Constructing partial words with subword complexities not achievable by full words
Theoretical Computer Science
Deciding representability of sets of words of equal length
DCFS'12 Proceedings of the 14th international conference on Descriptional Complexity of Formal Systems
The hardness of counting full words compatible with partial words
Journal of Computer and System Sciences
Deciding representability of sets of words of equal length
Theoretical Computer Science
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In this paper, we investigate partial words, or finite sequences that may have some undefined positions called holes, of maximum subword complexity The subword complexity function of a partial word w over a given alphabet of size k assigns to each positive integer n, the number pw(n) of distinct full words over the alphabet that are compatible with factors of length n of w For positive integers n, h and k, we introduce the concept of a de Bruijn partial word of order n with h holes over an alphabet A of size k, as being a partial word w with h holes over A of minimal length with the property that $p_w(n)=k^n$ We are concerned with the following three questions: (1) What is the length of k-ary de Bruijn partial words of order n with h holes? (2) What is an efficient method for generating such partial words? (3) How many such partial words are there?