Classification of biological sequences with kernel methods

Authors:
Jean-Philippe Vert
Affiliations:
Ecole des Mines de Paris, Centre for Computational Biology, Fontainebleau, France
Venue:
ICGI'06 Proceedings of the 8th international conference on Grammatical Inference: algorithms and applications
Year:
2006

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Abstract

We survey the foundations of kernel methods and the recent developments of kernels for variable-length strings, in the context of biological sequence analysis.