Solving ordinary differential equations I (2nd revised. ed.): nonstiff problems
Solving ordinary differential equations I (2nd revised. ed.): nonstiff problems
SIAM Journal on Numerical Analysis
Dimensional analysis in computer algebra
Proceedings of the 2001 international symposium on Symbolic and algebraic computation
Introduction to Maple
System Modeling in Cellular Biology: From Concepts to Nuts and Bolts
System Modeling in Cellular Biology: From Concepts to Nuts and Bolts
AB '08 Proceedings of the 3rd international conference on Algebraic Biology
On proving the absence of oscillations in models of genetic circuits
AB'07 Proceedings of the 2nd international conference on Algebraic biology
Reduction of algebraic parametric systems by rectification of their affine expanded lie symmetries
AB'07 Proceedings of the 2nd international conference on Algebraic biology
Proceedings of the 2010 International Symposium on Symbolic and Algebraic Computation
Chemical reaction systems, computer algebra and systems biology
CASC'11 Proceedings of the 13th international conference on Computer algebra in scientific computing
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We present the MABSys package which gathers, as much as possible, some functions to carry out the modeling of biochemical reaction networks, their qualitative analysis and the exact simplification of systems of ordinary differential equations. The main functions are illustrated with examples including the corresponding commands. Then we discuss Tyson's negative feedback oscillator model and the parameters values for which this system oscillates.