High-Throughput Compression of FASTQ Data with SeqDB
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
A generic high-performance method for deinterleaving scientific data
Euro-Par'13 Proceedings of the 19th international conference on Parallel Processing
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CPUs spend most of their time waiting for data to arrive. Identifying low-level bottlenecks-and how to ameliorate them-can save hours of frustration over poor performance in apparently well-written programs.