Explicit Nonadaptive Combinatorial Group Testing Schemes

  • Authors:
  • Ely Porat;Amir Rothschild

  • Affiliations:
  • Computer Sci., Bar-Ilan University, Ramat Gan, Israel;Ramot-Hashavim, Israel

  • Venue:
  • IEEE Transactions on Information Theory
  • Year:
  • 2011

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Abstract

Group testing is a long studied problem in combinatorics: A small set of $r$ ill people should be identified out of the whole ($n$ people) by using only queries (tests) of the form “Does set X contain an ill human?” In this paper we provide an explicit construction of a testing scheme which is better (smaller) than any known explicit construction. This scheme has $\Theta\left({\min[r^2 \ln n,n]}\right)$ tests which is as many as the best nonexplicit schemes have. In our construction, we use a fact that may have a value by its own right: Linear error-correction codes with parameters $[m,k,\delta m]_q$ meeting the Gilbert-Varshamov bound may be constructed quite efficiently, in $\Theta\left({q^km}\right)$ time.