Visual triangulation of network-based phylogenetic trees

Authors:
U. Brandes;T. Dwyer;F. Schreiber
Affiliations:
Department of Computer & Information Science, University of Konstanz, Germany;School of Information Technologies, University of Sydney, NSW, Australia;Bioinformatics Center, Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
Venue:
VISSYM'04 Proceedings of the Sixth Joint Eurographics - IEEE TCVG conference on Visualization
Year:
2004

Citing 6
Cited 1

Erratum: the Travelling Salesman and the Pq-Tree

Mathematics of Operations Research
Parallel implementation and performance of fastDNAml: a program for maximum likelihood phylogenetic inference

Proceedings of the 2001 ACM/IEEE conference on Supercomputing
A Multiple Alignment Algorithm for Metabolic Pathway Analysis Using Enzyme Hierarchy

Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology
K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data

WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
Case Study: Visualizing Sets of Evolutionary Trees

INFOVIS '02 Proceedings of the IEEE Symposium on Information Visualization (InfoVis'02)
TreeJuxtaposer: scalable tree comparison using Focus+Context with guaranteed visibility

ACM SIGGRAPH 2003 Papers

Extending the WilmaScope 3D graph visualisation system: software demonstration

APVis '05 proceedings of the 2005 Asia-Pacific symposium on Information visualisation - Volume 45

Quantified Score

Hi-index	0.00

Visualization

Abstract

Phylogenetic trees are built by examining differences in the biological traits of a set of species. An example of such a trait is a biological network such as a metabolic pathway, common to all species but with subtle differences in each. Phylogenetic trees of metabolic pathways represent multiple aspects of similarity and hypothetical evolution in a single, yet complex structure that is difficult to understand and interpret. We present a visualization method that facilitates analysis of such structures by presenting multiple coordinated perspectives simultaneously. Each of these perspectives constitutes a useful visualization in its own right, but it is only together that they unfold their full explorative power.