PathCase-SB: database-enabled tools for regulatory metabolic networks

Authors:
X. Qi;S. A. Coskun;A. Cakmak;E. Cheng;E. A. Cicek;M. Das;L. Yang;R. Jadeja;S. Syed;R. K. Dash;N. Lai;G. Özsoyoǧlu;Z. M. Özsoyoǧlu
Affiliations:
-;-;-;-;-;-;-;-;-;-;-;-;-
Venue:
ACM SIGBioinformatics Record
Year:
2012

Citing 5
Cited 0

Lineage retrieval for scientific data processing: a survey

ACM Computing Surveys (CSUR)
SBW - a modular framework for systems biology

Proceedings of the 38th conference on Winter simulation
LibSBML

Bioinformatics
Comparing simulation results of SBML capable simulators

Bioinformatics
PathCase

Bioinformatics

Quantified Score

Hi-index	0.00

Visualization

Abstract

Integration of metabolic pathways resources and metabolic network models, and deploying new tools on the integrated platform is useful for systems biology research on understanding the regulation of metabolic networks. PathCase-SB is such an integrative a web-based application, providing a database-enabled framework and tools towards effective and efficient systems biology model development for mechanistic simulations of biological systems. Current PathCase-SB user interfaces include browser, querying, visualization, provenance, simulation and model composition interfaces. PathCase-SB is built, released, and already being used by researchers across the globe.