Metal binding in proteins: machine learning complements x-ray absorption spectroscopy

Authors:
Marco Lippi;Andrea Passerini;Marco Punta;Paolo Frasconi
Affiliations:
Dipartimento di Ingegneria dell'Informazione, Università di Siena, Italy;Dipartimento di Ingegneria e Scienza dell'Informazione, Università di Trento, Italy;Wellcome Trust Sanger Institute, Hinxton, UK;Dipartimento di Sistemi e Informatica, Università di Firenze, Italy
Venue:
ECML PKDD'12 Proceedings of the 2012 European conference on Machine Learning and Knowledge Discovery in Databases - Volume Part II
Year:
2012

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Abstract

We present an application of machine learning algorithms for the identification of metalloproteins and metal binding sites on a genome scale. An extensive evaluation conducted in combination with X-ray absorption spectroscopy shows the great potentiality of the approach.