Journal of Computer and System Sciences
Membrane Computing: An Introduction
Membrane Computing: An Introduction
Type Disciplines for Analysing Biologically Relevant Properties
Electronic Notes in Theoretical Computer Science (ENTCS)
Modeling Ecosystems Using P Systems: The Bearded Vulture, a Case Study
Membrane Computing
Stochastic Calculus of Looping Sequences for the Modelling and Simulation of Cellular Pathways
Transactions on Computational Systems Biology IX
The calculus of looping sequences for modeling biological membranes
WMC'07 Proceedings of the 8th international conference on Membrane computing
Fundamenta Informaticae - From Mathematical Beauty to the Truth of Nature: to Jerzy Tiuryn on his 60th Birthday
On Designing Multicore-Aware Simulators for Biological Systems
PDP '11 Proceedings of the 2011 19th International Euromicro Conference on Parallel, Distributed and Network-Based Processing
Natural Computing: an international journal
A computational modeling for real ecosystems based on P systems
Natural Computing: an international journal
Modelling ammonium transporters in arbuscular mycorrhiza symbiosis
Transactions on computational systems biology XIII
Spatial Calculus of Looping Sequences
Theoretical Computer Science
A p system based model of an ecosystem of some scavenger birds
WMC'09 Proceedings of the 10th international conference on Membrane Computing
Simulation techniques for the calculus of wrapped compartments
Theoretical Computer Science
Typed stochastic semantics for the calculus of looping sequences
Theoretical Computer Science
On parallelizing on-line statistics for stochastic biological simulations
Euro-Par'11 Proceedings of the 2011 international conference on Parallel Processing - Volume 2
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The Calculus of Wrapped Compartments is a framework based on stochastic multiset rewriting in a compartmentalised setting originally developed for the modelling and analysis of biological interactions. In this paper, we propose to use this calculus for the description of ecological systems and we provide the modelling guidelines to encode within the calculus some of the main interactions leading ecosystems evolution. As a case study, we model the distribution of height of Croton wagneri, a shrub constituting the endemic predominant species of the dry ecosystem in southern Ecuador. In particular, we consider the plant at different altitude gradients (i.e. at different temperature conditions), to study how it adapts under the effects of global climate change.