An algorithm for finding novel gapped motifs in DNA sequences

Finding motifs using random projections

RECOMB '01 Proceedings of the fifth annual international conference on Computational biology

Biological Sequence Data Mining

PKDD '01 Proceedings of the 5th European Conference on Principles of Data Mining and Knowledge Discovery

A Hybrid Scoring Function for Protein Multiple Alignment

WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics

Extracting Common Motifs under the Levenshtein Measure: Theory and Experimentation

WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics

Using Suffix Trees for Gapped Motif Discovery

COM '00 Proceedings of the 11th Annual Symposium on Combinatorial Pattern Matching

REFINEMENT: A search framework for the identification of interferon-responsive elements in DNA sequences - a case study with ISRE and GAS

Computational Biology and Chemistry