Efficient algorithms for inverting evolution
Journal of the ACM (JACM)
Absolute convergence: true trees from short sequences
SODA '01 Proceedings of the twelfth annual ACM-SIAM symposium on Discrete algorithms
On the complexity of distance-based evolutionary tree reconstruction
SODA '03 Proceedings of the fourteenth annual ACM-SIAM symposium on Discrete algorithms
The Performance of Phylogenetic Methods on Trees of Bounded Diameter
WABI '01 Proceedings of the First International Workshop on Algorithms in Bioinformatics
Sequence-Length Requirements for Phylogenetic Methods
WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle
WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
NeighborNet: An Agglomerative Method for the Construction of Planar Phylogenetic Networks
WABI '02 Proceedings of the Second International Workshop on Algorithms in Bioinformatics
Learning nonsingular phylogenies and hidden Markov models
Proceedings of the thirty-seventh annual ACM symposium on Theory of computing
Distorted Metrics on Trees and Phylogenetic Forests
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Average case analysis for tree labelling schemes
Theoretical Computer Science
On the hardness of inferring phylogenies from triplet-dissimilarities
Theoretical Computer Science
Fast and reliable reconstruction of phylogenetic trees with very short edges
Proceedings of the nineteenth annual ACM-SIAM symposium on Discrete algorithms
NAPX: A Polynomial Time Approximation Scheme for the Noah's Ark Problem
WABI '08 Proceedings of the 8th international workshop on Algorithms in Bioinformatics
Phylogenies without Branch Bounds: Contracting the Short, Pruning the Deep
RECOMB 2'09 Proceedings of the 13th Annual International Conference on Research in Computational Molecular Biology
Constructing Level-2 Phylogenetic Networks from Triplets
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Constructing level-2 phylogenetic networks from triplets
RECOMB'08 Proceedings of the 12th annual international conference on Research in computational molecular biology
Reconstructing approximate phylogenetic trees from quartet samples
SODA '10 Proceedings of the twenty-first annual ACM-SIAM symposium on Discrete Algorithms
Quartets MaxCut: A Divide and Conquer Quartets Algorithm
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
An Approximation Algorithm for the Noah's Ark Problem with Random Feature Loss
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Topology discovery of sparse random graphs with few participants
Proceedings of the ACM SIGMETRICS joint international conference on Measurement and modeling of computer systems
Fast error-tolerant quartet phylogeny algorithms
CPM'11 Proceedings of the 22nd annual conference on Combinatorial pattern matching
Towards a practical O(n log n) phylogeny algorithm
WABI'11 Proceedings of the 11th international conference on Algorithms in bioinformatics
The Complexity of Finding Multiple Solutions to Betweenness and Quartet Compatibility
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
Alignment-Free phylogenetic reconstruction
RECOMB'10 Proceedings of the 14th Annual international conference on Research in Computational Molecular Biology
Maximal accurate forests from distance matrices
RECOMB'06 Proceedings of the 10th annual international conference on Research in Computational Molecular Biology
Fast phylogenetic tree reconstruction using locality-sensitive hashing
WABI'12 Proceedings of the 12th international conference on Algorithms in Bioinformatics
Fast error-tolerant quartet phylogeny algorithms
Theoretical Computer Science
A survey on latent tree models and applications
Journal of Artificial Intelligence Research
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