On distances between phylogenetic trees

On reconstructing species trees from gene trees in term of duplications and losses

RECOMB '98 Proceedings of the second annual international conference on Computational molecular biology

Efficient algorithms for lateral gene transfer problems

RECOMB '01 Proceedings of the fifth annual international conference on Computational biology

Improved Phylogeny Comparisons: Non-shared Edges, Nearest Neighbor Interchanges, and Subtree Transfers

ISAAC '00 Proceedings of the 11th International Conference on Algorithms and Computation

Better Approximation of Diagonal-Flip Transformation and Rotation Transformation

COCOON '98 Proceedings of the 4th Annual International Conference on Computing and Combinatorics

Some Approximation Results for the Maximum Agreement Forest Problem

APPROX '01/RANDOM '01 Proceedings of the 4th International Workshop on Approximation Algorithms for Combinatorial Optimization Problems and 5th International Workshop on Randomization and Approximation Techniques in Computer Science: Approximation, Randomization and Combinatorial Optimization

Case Study: Visualizing Sets of Evolutionary Trees

INFOVIS '02 Proceedings of the IEEE Symposium on Information Visualization (InfoVis'02)

Simultaneous identification of duplications and lateral transfers

RECOMB '04 Proceedings of the eighth annual international conference on Resaerch in computational molecular biology

On contract-and-refine transformations between phylogenetic trees

SODA '04 Proceedings of the fifteenth annual ACM-SIAM symposium on Discrete algorithms

Non-shared edges and nearest neighbor interchanges revisited

Information Processing Letters

The maximum agreement forest problem: Approximation algorithms and computational experiments

Theoretical Computer Science

Seeded Tree Alignment

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

Drawing (Complete) Binary Tanglegrams

Graph Drawing

The Gene-Duplication Problem: Near-Linear Time Algorithms for NNI-Based Local Searches

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

Approximating the nearest neighbor interchange distance for evolutionary trees with non-uniform degrees

COCOON'99 Proceedings of the 5th annual international conference on Computing and combinatorics

Evolving phylogenetic trees: a multiobjective approach

BSB'07 Proceedings of the 2nd Brazilian conference on Advances in bioinformatics and computational biology

The gene-duplication problem: near-linear time algorithms for NNI based local searches

ISBRA'08 Proceedings of the 4th international conference on Bioinformatics research and applications

Metrics on Multilabeled Trees: Interrelationships and Diameter Bounds

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

A metric for phylogenetic trees based on matching

ISBRA'11 Proceedings of the 7th international conference on Bioinformatics research and applications

A distance for partially labeled trees

IbPRIA'11 Proceedings of the 5th Iberian conference on Pattern recognition and image analysis

Matching Split Distance for Unrooted Binary Phylogenetic Trees

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

Boolean property encoding for local set pattern discovery: an application to gene expression data analysis

LPD'04 Proceedings of the 2004 international conference on Local Pattern Detection

A Metric for Phylogenetic Trees Based on Matching

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

A robinson-foulds measure to compare unrooted trees with rooted trees

ISBRA'12 Proceedings of the 8th international conference on Bioinformatics Research and Applications

Seeded tree alignment and planar tanglegram layout

WABI'07 Proceedings of the 7th international conference on Algorithms in Bioinformatics