Algorithms
The parallel fast multipole method in molecular dynamics
The parallel fast multipole method in molecular dynamics
Using PLAPACK: parallel linear algebra package
Using PLAPACK: parallel linear algebra package
Database System Concepts
On Partitioning Dynamic Adaptive Grid Hierarchies
HICSS '96 Proceedings of the 29th Hawaii International Conference on System Sciences Volume 1: Software Technology and Architecture
The rapid evaluation of potential fields in particle systems
The rapid evaluation of potential fields in particle systems
A unifying data structure for hierarchical methods
SC '99 Proceedings of the 1999 ACM/IEEE conference on Supercomputing
Design of dynamic load-balancing tools for parallel applications
Proceedings of the 14th international conference on Supercomputing
Global static indexing for real-time exploration of very large regular grids
Proceedings of the 2001 ACM/IEEE conference on Supercomputing
Large scale parallel structured AMR calculations using the SAMRAI framework
Proceedings of the 2001 ACM/IEEE conference on Supercomputing
An Application-Centric Characterization of Domain-Based SFC Partitioners for Parallel SAMR
IEEE Transactions on Parallel and Distributed Systems
A Comparison of Partitioning Schemes for Blockwise Parallel SAMR Algorithms
PARA '00 Proceedings of the 5th International Workshop on Applied Parallel Computing, New Paradigms for HPC in Industry and Academia
Optimal Parameter Values for a Parallel Structured Adaptive Mesh Refinement Algorithm
PARA '00 Proceedings of the 5th International Workshop on Applied Parallel Computing, New Paradigms for HPC in Industry and Academia
An Evaluation of Partitioners for Parallel SAMR Applications
Euro-Par '01 Proceedings of the 7th International Euro-Par Conference Manchester on Parallel Processing
Distributed dynamic hash tables using IBM LAPI
Proceedings of the 2002 ACM/IEEE conference on Supercomputing
Engineering an autonomic partitioning framework for Grid-based SAMR applications
High performance scientific and engineering computing
Towards autonomic application-sensitive partitioning for SAMR applications
Journal of Parallel and Distributed Computing
General parallel computations on desktop grid and P2P systems
LCR '04 Proceedings of the 7th workshop on Workshop on languages, compilers, and run-time support for scalable systems
Coupling Multicomponent Models with MPH on Distributed Memory Computer Architectures
International Journal of High Performance Computing Applications
SpringSim '07 Proceedings of the 2007 spring simulation multiconference - Volume 2
IPDPS'06 Proceedings of the 20th international conference on Parallel and distributed processing
Massive data pre-processing with a cluster based approach
EG PGV'04 Proceedings of the 5th Eurographics conference on Parallel Graphics and Visualization
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This paper presents the design, development and application of a computational infrastructure to support the implementation of parallel adaptive algorithms for the solution of sets of partial differential equations. The infrastructure is separated into multiple layers of abstraction. This paper is primarily concerned with the two lowest layersof this infrastructure: a layer which defines and implements dynamic distributed arrays (DDA), and a layer in which several dynamic data and programming abstractions are implemented in terms of the DDAs. The currently implemented abstractions are those needed for formulation of hierarchical adaptive finite difference methods, hp-adaptive finite element methods, and fast multipole method for solution of linear systems. Implementation of sample applications based on each of these methods are described and implementation issues and performance measurements are presented.