Journal of Computational Chemistry
Heuristics, optimizations, and parallelism for protein structure prediction in CLP(FD)
PPDP '05 Proceedings of the 7th ACM SIGPLAN international conference on Principles and practice of declarative programming
DFS Based Partial Pathways in GA for Protein Structure Prediction
PRIB '08 Proceedings of the Third IAPR International Conference on Pattern Recognition in Bioinformatics
Twin Removal in Genetic Algorithms for Protein Structure Prediction Using Low-Resolution Model
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
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The authors describe the state of the art in the field of protein structure prediction. They also introduce Prospector, a newly developed, iterative threading algorithm for protein structure prediction that can also be applied to ab initio protein folding.