Communications of the ACM
A brief look at some machine learning problems in genomics
COLT '97 Proceedings of the tenth annual conference on Computational learning theory
Improved splice site detection in Genie
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
Reference-based gene model prediction on DNA contigs (extended abstract)
RECOMB '97 Proceedings of the first annual international conference on Computational molecular biology
A dictionary based approach for gene annotation
RECOMB '99 Proceedings of the third annual international conference on Computational molecular biology
Applications of generalized pair hidden Markov models to alignment and gene finding problems
RECOMB '01 Proceedings of the fifth annual international conference on Computational biology
Combining phylogenetic and hidden Markov models in biosequence analysis
RECOMB '03 Proceedings of the seventh annual international conference on Research in computational molecular biology
Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals
RECOMB '03 Proceedings of the seventh annual international conference on Research in computational molecular biology
A Better Method for Length Distribution Modeling in HMMs and Its Application to Gene Finding
CPM '02 Proceedings of the 13th Annual Symposium on Combinatorial Pattern Matching
Mining biomolecular data using background knowledge and artificial neural networks
Handbook of massive data sets
Visualization Techniques for Genomic Data
CSB '02 Proceedings of the IEEE Computer Society Conference on Bioinformatics
Computational identification of evolutionarily conserved exons
RECOMB '04 Proceedings of the eighth annual international conference on Resaerch in computational molecular biology
Multiple organism gene finding by collapsed gibbs sampling
RECOMB '04 Proceedings of the eighth annual international conference on Resaerch in computational molecular biology
A digital signal processing method for gene prediction with improved noise suppression
EURASIP Journal on Applied Signal Processing
Ad Hoc Data and the Token Ambiguity Problem
PADL '09 Proceedings of the 11th International Symposium on Practical Aspects of Declarative Languages
An Inductive Logic Programming Approach to Statistical Relational Learning
Proceedings of the 2005 conference on An Inductive Logic Programming Approach to Statistical Relational Learning
Journal of Artificial Intelligence Research
Hidden hybrid Markov/semi-Markov chains
Computational Statistics & Data Analysis
Hidden Markov models in biological sequence analysis
IBM Journal of Research and Development
Advancing the state of the art in computational gene prediction
KDECB'06 Proceedings of the 1st international conference on Knowledge discovery and emergent complexity in bioinformatics
Regularizing multiple kernel learning using response surface methodology
Pattern Recognition
International Journal of Data Mining and Bioinformatics
A gene structure prediction program using duration HMM
VDMB'06 Proceedings of the First international conference on Data Mining and Bioinformatics
A brief comparison of DSP and HMM methods for gene finding
Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine
Design and Analysis of Classifier Learning Experiments in Bioinformatics: Survey and Case Studies
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)
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