A Hidden Markov Model for Predicting Transmembrane Helices in Protein Sequences

The consensus string problem and the complexity of comparing hidden Markov models

Journal of Computer and System Sciences - Computational biology 2002

Comparing a Hidden Markov Model and a Stochastic Context-Free Grammar

WABI '01 Proceedings of the First International Workshop on Algorithms in Bioinformatics

Complexity of Comparing Hidden Markov Models

ISAAC '01 Proceedings of the 12th International Symposium on Algorithms and Computation

Identification of fundamental building blocks in protein sequences using statistical association measures

Proceedings of the 2004 ACM symposium on Applied computing

The GeneMine system for genome/proteome annotation and collaborative data mining

IBM Systems Journal - Deep computing for the life sciences

Modeling and predicting all-α transmembrane proteins including helix-helix pairing

Theoretical Computer Science - Pattern discovery in the post genome

Brief communication: In silico identification of the protein disulfide isomerase family from a protozoan parasite

Computational Biology and Chemistry

Brief communication: In silico identification of the protein disulfide isomerase family from a protozoan parasite

Computational Biology and Chemistry

TOPTMH: Topology Predictor for Transmembrane α-Helices

ECML PKDD '08 Proceedings of the 2008 European Conference on Machine Learning and Knowledge Discovery in Databases - Part I

Comparing two K-category assignments by a K-category correlation coefficient

Computational Biology and Chemistry

pTest: an adaptive testing tool for concurrent software on embedded multicore processors

Proceedings of the Conference on Design, Automation and Test in Europe

Transducer inference by assembling specific languages

ICGI'10 Proceedings of the 10th international colloquium conference on Grammatical inference: theoretical results and applications

Mining class-correlated patterns for sequence labeling

DS'10 Proceedings of the 13th international conference on Discovery science

Understandable learning machine system design for Transmembrane or Embedded Membrane segments prediction

International Journal of Data Mining and Bioinformatics

A genetic algorithm to enhance transmembrane helices prediction

Proceedings of the 13th annual conference on Genetic and evolutionary computation

A machine text-inspired machine learning approach for identification of transmembrane helix boundaries

ISMIS'05 Proceedings of the 15th international conference on Foundations of Intelligent Systems

Syntactic approach to predict membrane spanning regions of transmembrane proteins

EC'05 Proceedings of the 3rd European conference on Applications of Evolutionary Computing

Computational biology and language

Ambient Intelligence for Scientific Discovery

Genome-wide functional annotation environment for thermus thermophilus in OBIGrid

LSGRID'04 Proceedings of the First international conference on Life Science Grid

A hidden Markov model with molecular mechanics energy-scoring function for transmembrane helix prediction

Computational Biology and Chemistry

ConPred_elite: a highly reliable approach to transmembrane topology prediction

Computational Biology and Chemistry