Combinatorial optimization
Neural Networks: A Comprehensive Foundation
Neural Networks: A Comprehensive Foundation
An Experimental Comparison of Min-cut/Max-flow Algorithms for Energy Minimization in Vision
EMMCVPR '01 Proceedings of the Third International Workshop on Energy Minimization Methods in Computer Vision and Pattern Recognition
Incorporating Spatial Priors into an Information Theoretic Approach for fMRI Data Analysis
MICCAI '00 Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention
Segmentation by Grouping Junctions
CVPR '98 Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
Markov Random Fields with Efficient Approximations
CVPR '98 Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
Alignment by maximization of mutual information
ICCV '95 Proceedings of the Fifth International Conference on Computer Vision
A Maximum-Flow Formulation of the N-Camera Stereo Correspondence Problem
ICCV '98 Proceedings of the Sixth International Conference on Computer Vision
An automated three-dimensional plus time registration framework for dynamic MR renography
Journal of Visual Communication and Image Representation
New motion correction models for automatic identification of renal transplant rejection
MICCAI'07 Proceedings of the 10th international conference on Medical image computing and computer-assisted intervention
Graph cuts framework for kidney segmentation with prior shape constraints
MICCAI'07 Proceedings of the 10th international conference on Medical image computing and computer-assisted intervention - Volume Part I
Automatic segmentation of blood vessels from dynamic MRI datasets
MICCAI'07 Proceedings of the 10th international conference on Medical image computing and computer-assisted intervention - Volume Part I
Non-invasive image-based approach for early detection of acute renal rejection
MICCAI'10 Proceedings of the 13th international conference on Medical image computing and computer-assisted intervention: Part I
Integrated four dimensional registration and segmentation of dynamic renal MR images
MICCAI'06 Proceedings of the 9th international conference on Medical Image Computing and Computer-Assisted Intervention - Volume Part II
A fully automated framework for renal cortex segmentation
MICCAI'12 Proceedings of the 4th international conference on Abdominal Imaging: computational and clinical applications
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This paper describes a new segmentation technique for multi-dimensional dynamic data. One example of such data is a perfusion sequence where a number of 3D MRI volumes shows the dynamics of a contrast agent inside the kidney or heart at end-diastole. We assume that the volumes are registered. If not, we register consecutive volumes via mutual information maximization. The sequence of n registered volumes is regarded as a single volume where each voxel holds an n-dimensional vector of intensities, or intensity curve. Our approach is to segment this volume directly based on voxels intensity curves using a generalization of the graph cut techniques in [7, 2]. These techniques use a spatial Markov model to describe correlations between voxels. Our contribution is in introducing a temporal Markov model to describe the desired dynamic properties of segments. Graph cuts obtain a globally optimal segmentation with the best balance between boundary and regional properties among all segmentations satisfying user placed hard constraints. Flexibility, coherent theoretical formulation, and the possibility of a globally optimal solution are attractive features of our method that gracefully handles even low quality data. We demonstrate results for 3D kidney and 2D heart perfusion sequences.