A sub-quadratic sequence alignment algorithm for unrestricted cost matrices
SODA '02 Proceedings of the thirteenth annual ACM-SIAM symposium on Discrete algorithms
A Boyer-Moore Type Algorithm for Compressed Pattern Matching
COM '00 Proceedings of the 11th Annual Symposium on Combinatorial Pattern Matching
Pattern Matching in Text Compressed by Using Antidictionaries
CPM '99 Proceedings of the 10th Annual Symposium on Combinatorial Pattern Matching
Shift-And Approach to Pattern Matching in LZW Compressed Text
CPM '99 Proceedings of the 10th Annual Symposium on Combinatorial Pattern Matching
Speeding Up Pattern Matching by Text Compression
CIAC '00 Proceedings of the 4th Italian Conference on Algorithms and Complexity
String pattern matching for a deluge survival kit
Handbook of massive data sets
LICS '00 Proceedings of the 15th Annual IEEE Symposium on Logic in Computer Science
Fundamenta Informaticae - Special issue on computing patterns in strings
Compressed Pattern Matching in DNA Sequences
CSB '04 Proceedings of the 2004 IEEE Computational Systems Bioinformatics Conference
Heuristic compression of an English word list: Research Articles
Software—Practice & Experience
SASE: implementation of a compressed text search engine
USITS'97 Proceedings of the USENIX Symposium on Internet Technologies and Systems on USENIX Symposium on Internet Technologies and Systems
A fast dynamic compression scheme for natural language texts
Computers & Mathematics with Applications
Random access to grammar-compressed strings
Proceedings of the twenty-second annual ACM-SIAM symposium on Discrete Algorithms
Fundamenta Informaticae - Computing Patterns in Strings
Speeding up HMM decoding and training by exploiting sequence repetitions
CPM'07 Proceedings of the 18th annual conference on Combinatorial Pattern Matching
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