The quasi-steady state assumption: a case study in perturbation

Automatic identification of time scales in enzyme kinetics models

ISSAC '94 Proceedings of the international symposium on Symbolic and algebraic computation

Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems

Journal of Computational Physics

Complexity reduction of biochemical networks

Proceedings of the 38th conference on Winter simulation

Reversible-equivalent-monomolecular tau: A leaping method for "small number and stiff" stochastic chemical systems

Journal of Computational Physics

Deterministic and stochastic models of enzymatic networks-applications to pharmaceutical research

Computers & Mathematics with Applications

The total quasi-steady-state approximation for complex enzyme reactions

Mathematics and Computers in Simulation

The G-Scheme: A framework for multi-scale adaptive model reduction

Journal of Computational Physics

Model Reduction Using Piecewise-Linear Approximations Preserves Dynamic Properties of the Carbon Starvation Response in Escherichia coli

IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)

Streamlined formulation of adaptive explicit-implicit tau-leaping with automatic tau selection

Winter Simulation Conference

From cardiac cells to genetic regulatory networks

CAV'11 Proceedings of the 23rd international conference on Computer aided verification

Parallelized agent-based simulation on CPU and graphics hardware for spatial and stochastic models in biology

Proceedings of the 9th International Conference on Computational Methods in Systems Biology

A new time-dependent complexity reduction method for biochemical systems

Transactions on Computational Systems Biology I

Enzyme kinetics far from the standard quasi-steady-state and equilibrium approximations

Mathematical and Computer Modelling: An International Journal

Tropical Geometries and Dynamics of Biochemical Networks Application to Hybrid Cell Cycle Models

Electronic Notes in Theoretical Computer Science (ENTCS)

From enzyme kinetics to epidemiological models with Michaelis-Menten contact rate: Design of nonstandard finite difference schemes

Computers & Mathematics with Applications

Time dependent solution for acceleration of tau-leaping

Journal of Computational Physics