Dangers of multiple time step methods
Journal of Computational Physics
A Family of Symplectic Integrators: Stability, Accuracy, and Molecular Dynamics Applications
SIAM Journal on Scientific Computing
Long-Time-Step Methods for Oscillatory Differential Equations
SIAM Journal on Scientific Computing
NAMD2: greater scalability for parallel molecular dynamics
Journal of Computational Physics - Special issue on computational molecular biophysics
Stability of a Numerical Solution of Differential Equations
Journal of the ACM (JACM)
A reversible averaging integrator for multiple time-scale dynamics
Journal of Computational Physics
Nonlinear Stability Analysis of Area-Preserving Integrators
SIAM Journal on Numerical Analysis
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This paper discusses additional stability limitations of multiple time stepping (MTS) integrators for molecular dynamics (MD) that attempt to bridge time scales. In particular, it is shown that when constant-energy (NVE) simulations of Newton's equations of motion are attempted using the Verlet-I/r-RESPA/Impulse, there are nonlinear instabilities when the longest step size is one third and possibly one fourth of the period(s) of the fastest motion(s) in the system. This is demonstrated both thorough the analysis of a nonlinear model problem and through a through set of numerical simulations.