Fast parallel algorithms for short-range molecular dynamics
Journal of Computational Physics
Thread migration and its applications in distributed shared memory systems
Journal of Systems and Software
Efficient parallel algorithms for molecular dynamics simulations
Parallel Computing
Space-time trade-off optimization for a class of electronic structure calculations
PLDI '02 Proceedings of the ACM SIGPLAN 2002 Conference on Programming language design and implementation
IPDPS '02 Proceedings of the 16th International Parallel and Distributed Processing Symposium
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Different parallelization methods vary in their system requirements, programming styles, efficiency of exploring parallelism, and the application characteristics they can handle. For different situations, they can exhibit totally different performance gains. This chapter compares OpenMP, MPI, and Strings for parallelizing a complicated tribology problem. The problem size and computing infrastructure is changed to assess the impact of this on various parallelization methods. All of them exhibit good performance improvements and it exhibits the necessity and importance of applying parallelization in this field.