Integrating Ontology and Workflow in PROTEUS, a Grid-Based Problem Solving Environment for Bioinformatics

Authors:
Mario Cannataro;Carmela Comito;Antonella Guzzo;Pierangelo Veltri
Affiliations:
-;-;-;-
Venue:
ITCC '04 Proceedings of the International Conference on Information Technology: Coding and Computing (ITCC'04) Volume 2 - Volume 2
Year:
2004

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Abstract

Bioinformatics is as a bridge between life science andcomputer science: computer algorithms are needed toface complexity of biological processes. Bioinformaticsapplications manage complex biological data stored intodistributed and often heterogeneous databases andrequire large computing power. We discuss requirementsof such applications and present the architecture ofPROTEUS, a Grid-based Problem Solving Environmentthat integrates ontology and workflow approaches toenhance composition and execution of bioinformaticsapplications on the Grid.