GeneX: an open source gene expression database and integrated tool set

Authors:
H. Mangalam;J. Stewart;J. Zhou;K. Schlauch;M. Waugh;G. Chen;A. D. Farmer;G. Colello;J. W. Weller
Affiliations:
National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, New Mexico;OpenInformatics, 620 Arizona Street SE, Albuquerque, New Mexico;Inztro, 2521 San Pedro Drive NE, Suite F, Albuquerque, New Mexico;Virginia Bioinformatics Institute, 1750 Kraft Drive, Suite 1100, Blacksburg, Virginia;National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, New Mexico;National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, New Mexico;National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, New Mexico;National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, New Mexico;Virginia Bioinformatics Institute, 1750 Kraft Drive, Suite 1400, Virginia Polytechnic Institute, Blacksburg, Virginia
Venue:
IBM Systems Journal - Deep computing for the life sciences
Year:
2001

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Abstract

Because gene expression profiles are highly sensitive to sample and processing conditions, it is crucial to accurately represent these conditions along with the numeric data in a way that allows the conditions to be part of a query. The GeneXTM project is intended to provide an Open Source database and integrated tool set that will allow researchers to store and evaluate their gene expression data and, moreover, such evaluation will be independent of the technology used to obtain the data.