Episode directed acyclic subsequence graph

  • Authors:
  • Zdeněk Troníček

  • Affiliations:
  • Dept. of Comp. Science and Eng., FEE Czech Technical University in Prague Karlovo nám. 13, 121 35 Prague 2, Czech Republic

  • Venue:
  • Nordic Journal of Computing
  • Year:
  • 2004

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Abstract

Given two strings, pattern P and text T, episode substring of P in T is a minimal substring of T that contains P as a subsequence. The episode matching problem is to find all episode substrings. We present a new data structure called Episode Directed Acyclic Subsequence Graph that can be used to solve the problem very quickly. With the structure, we can find for example all episode substrings or the shortest episode substring in O(mw) time where m is the length of the pattern and w is the number of episode substrings found.