Constructing (Almost) phylogenetic trees from developmental sequences data

Authors:
Ronnie Bathoorn;Arno Siebes
Affiliations:
Institute of Information & Computing Sciences, Utrecht University, 3508TB Utrecht, The Netherlands;Institute of Information & Computing Sciences, Utrecht University, 3508TB Utrecht, The Netherlands
Venue:
PKDD '04 Proceedings of the 8th European Conference on Principles and Practice of Knowledge Discovery in Databases
Year:
2004

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Abstract

In this paper we present a new way of constructing almost phylogenetic trees. Almost since we reconstruct the tree, but without the timestamps. Rather than basing the tree on genetic sequence data ours is based on developmental sequence data. Using frequent episode discovery and clustering we reconstruct the consensus tree from the literature almost completely.