Support vector machine for prediction of DNA-binding domains in protein-DNA complexes
LSMS'07 Proceedings of the 2007 international conference on Life System Modeling and Simulation
| Hi-index | 3.84 |
Summary: PreDs is a WWW server that predicts the dsDNA-binding sites on protein molecular surfaces generated from the atomic coordinates in a PDB format. The prediction was done by evaluating the electrostatic potential, the local curvature and the global curvature on the surfaces. Results of the prediction can be interactively checked with our original surface viewer. Availability: PreDs is available free of charge from http://pre-s.protein.osaka-u.ac.jp/~preds/ Contact: kino@ims.u-tokyo.ac.jp