Protein Explorer: A Petaflops Special-Purpose Computer System for Molecular Dynamics Simulations
Proceedings of the 2003 ACM/IEEE conference on Supercomputing
FPGA acceleration of a quantum Monte Carlo application
Parallel Computing
Particle graphics on reconfigurable hardware
ACM Transactions on Reconfigurable Technology and Systems (TRETS)
Beyond homogeneous decomposition: scaling long-range forces on Massively Parallel Systems
Proceedings of the Conference on High Performance Computing Networking, Storage and Analysis
Axel: a heterogeneous cluster with FPGAs and GPUs
Proceedings of the 18th annual ACM/SIGDA international symposium on Field programmable gate arrays
Programming framework for clusters with heterogeneous accelerators
ACM SIGARCH Computer Architecture News
Accurate Area, Time and Power Models for FPGA-Based Implementations
Journal of Signal Processing Systems
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The goal of the Gravity Pipe (GRAPE) project is to accelerate astrophysical N-body simulations. Because almost all computing time is spent evaluating the gravitational force between particles, we can greatly accelerate many N-body simulations by developing a specialized hardware system for the force calculation.