Ranking target objects of navigational queries
WIDM '06 Proceedings of the 8th annual ACM international workshop on Web information and data management
Query Planning for Searching Inter-dependent Deep-Web Databases
SSDBM '08 Proceedings of the 20th international conference on Scientific and Statistical Database Management
Linking Biological Databases Semantically for Knowledge Discovery
ER '08 Proceedings of the ER 2008 Workshops (CMLSA, ECDM, FP-UML, M2AS, RIGiM, SeCoGIS, WISM) on Advances in Conceptual Modeling: Challenges and Opportunities
BiOnMap: a deductive approach for resource discovery
Proceedings of the 10th International Conference on Information Integration and Web-based Applications & Services
Customized and Optimized Service Selection with ProtocolDB
Globe '09 Proceedings of the 2nd International Conference on Data Management in Grid and Peer-to-Peer Systems
Efficiently selecting the best web services
RED'09 Proceedings of the 2nd international conference on Resource discovery
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We present a framework that uses semantic modeling to represent biological data sources, the multiple links that capture relationships among them, as well as the various applications that transform or analyze biological data. We introduce a data model that encompass three layers: the ontological layer composed of an ontology to represent the scientific concepts and their relationships, the physical layer of the physical resources made available to the scientists, and the data layer composed of the entries accessible through the different resources.