A survey of approaches to automatic schema matching
The VLDB Journal — The International Journal on Very Large Data Bases
Similarity Flooding: A Versatile Graph Matching Algorithm and Its Application to Schema Matching
ICDE '02 Proceedings of the 18th International Conference on Data Engineering
The PROMPT suite: interactive tools for ontology merging and mapping
International Journal of Human-Computer Studies
Structure and content scoring for XML
VLDB '05 Proceedings of the 31st international conference on Very large data bases
Semantic-integration research in the database community
AI Magazine - Special issue on semantic integration
A Classification for Comparing Standardized XML Data
DEXA '06 Proceedings of the 17th International Conference on Database and Expert Systems Applications
SAMBO-A system for aligning and merging biomedical ontologies
Web Semantics: Science, Services and Agents on the World Wide Web
COMA: a system for flexible combination of schema matching approaches
VLDB '02 Proceedings of the 28th international conference on Very Large Data Bases
Formalizing the XML schema matching problem as a constraint optimization problem
DEXA'05 Proceedings of the 16th international conference on Database and Expert Systems Applications
On the midpoint of a set of XML documents
DEXA'05 Proceedings of the 16th international conference on Database and Expert Systems Applications
A framework for aligning ontologies
PPSWR'05 Proceedings of the Third international conference on Principles and Practice of Semantic Web Reasoning
Challenges for modeling and simulation methods in systems biology
Proceedings of the 38th conference on Winter simulation
Improving the usability of standard schemas
Information Systems
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Standards and standardized data representation to allow efficient exchange of information is an important topic within systems biology. Within this area there is currently a rapid development of new standards as well as a need for import of datasets into various computer tools for further analysis. As the number of available standards within systems biology is large, tools for comparison and translation of standards are of high interest. In this paper we present a method for comparison of standards. We illustrate how the method works by providing an analysis of the three standards SBML, PSI MI and BioPAX. The analysis gives information on how similar the three standards are and it also gives pointers on how to build tools to aid a user in the analysis of a standard.